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⇤ ← Revision 1 as of 2020-04-13 14:41:11
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| Whatever you read here may need some adjustment to fit your specific case. Do not hesitate to ask for some help. |
Whatever you read here may need to be adjusted to fit your specific case. Do not hesitate to ask for some help wen needed. |
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| # Load your software/command module load CMD |
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| spades.py | CMD [OPTIONS] ARGUMENTS |
Contents
Submitting jobs
Whatever you read here may need to be adjusted to fit your specific case. Do not hesitate to ask for some help wen needed.
Example of batch script
1 #!/bin/bash
2
3 #SBATCH -J test # Job name
4 #SBATCH -o /work/<<UID>>/job.%j.out # Name of stdout output file (%j expands to jobId)
5 #SBATCH -N 1 # Total number of nodes requested
6 #SBATCH -n 16 # Total number of mpi tasks requested
7 #SBATCH -t 01:30:00 # Run time (hh:mm:ss) - 1.5 hours
8
9 # Load your software/command
10 module load CMD
11
12 # Run your command
13 CMD [OPTIONS] ARGUMENTS